Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951862.1_cds_XP_016491766.1_82049
CDS Infomation

[gene=LOC107811366] [db_xref=GeneID:107811366] [protein=cytochrome c biogenesis protein CCS1, chloroplastic-like] [protein_id=XP_016491766.1] [location=join(22122..22554,23732..23951,24046..24157,24812..25084,25189..25457,25647..25803,25894..25977,26071..26262)] [gbkey=CDS]
Sequence

ATGGAAACTCTAAAGATTTCAACTACACCATCAACAATGTCACACATACAAAACCAAATT
CATCCCTTAAATCTCAAACCTTATCCCCTTATCCGCAATTCTCGAATTCTTGGTGTGTAC
AACAACAAAGGTGGCCGCACATTTTCCTTTACTCTTACATGTAAGCTCAAAGTCAAAACA
GTTAAAGGAACTAAAACCAACAATGAAAAAAGCTTTTCTGGTCAGATTACAGTGCCTGAT
TCTGATAGTGCACCACCAATTATTGAAGCAGAAGAAGGGTCTATAGGAAATGGTGAAAAG
AAAGTGGAGCAGAAAAATAGCGTTTCTGGTTCAGGACTGTTGAAGAAATTGCCTAGAAAA
TTTTTGGGAATTTTGTCCAATTTGCCTTTGGCTATTGCTGAGATGTTTGCTGTTGCTGGC
TTAATGGCCTTAGGAACTTTCATTGACCAAGGCGAGGCACCTGATTACTACTTTCAAAAG
TTTCCGGACGATCATCCTTCCCTGGGTTTTTTCTCTTGGAGATGGGTTCTTACCCTTGGC
TTTGATCATATGTTCTCATCACCGGTATTCCTAGGAACATTGACTCTTCTAGGAGCATCG
TTGATGGCCTGCACATACACAACACAGATTCCCCTTGTGAAGGTAGCAAGAAGATGGTCT
TTCTTAAACTCGGCAGAGACAATCCGTAAGCAAGAATATGCAGACACTCTGCCTAGGGCA
TCAGTTAAAGACTTGGGTGTTATACTGATGGGAGATGGATACGAGGTATTCTCGAAAGGG
CCAGCTCTGTATGCATTTAAAGGGTTGGCAGGTAGATTCGCTCCAATTGGCGTACATTTA
TCACTGCTGCTTGTAATGTCTGGAGGAACACTTAGTGCAACCGGGAGCTTTAGAGGGGCT
GTGACTGTTCCACAAGGTTTAAATTTTGTCGCGGGTGATGTACTTTCACCATCTGGGTTT
CTATCCACTCCTTCTGATGCTTTCAGTACAGAGATTCATGTCAATCGATTCTCCATGGAC
TACTATGACAGTGGGGAGGTATCACAGTTCCATACTGATCTTTCACTATATGACCTTAAT
GGAAAGGAAGTAATGAGGAAGACTATAAGTGTCAATGATCCATTAAGGTACGGGGGAATC
ACTATATACCAAACAGATTGGAGTATATCAGCGCTTCAAGTTCTGAAGGATGGCAAAGGT
CCTTTTAATTTGGCTATGGCACCACTGCAAATGAATGGGGGTGACAAGAAGCTCTTTGGT
ACTTTCCTACCAGTCGAAGATGGTGATTCGCCCAATGTTAAGGGAATATCAATGCTAGCA
CGTGATTTGCAGTCAGTTATTCTTTATGATAAACAAGGAAAATTCGCTGGAGTCAGACGG
CCTAATTCCAAGCTTCCAATTGAGATTGATGGAACAAAAATTGTTATTGTAGATGCAATT
GGCAGTAGTGGCCTTGACCTAAAGACTGATCCAGGAGTACCTGTTGTCTATGCTGGTTTT
GGTGCTCTAATGCTTACAACTTGCATCAGTTATTTATCTCATACACAGCTATGGGCCTTG
CAAGATGGGACATCGGTGGTGGTGGGGGGTAAGACCAACCGGGCCAAGGGTGAGTTTCCT
GATGCAATCAATCGCTTGCTCGATCAAGTCCCTGAATTAGTTGAATCATCTTCTTCCAAG
GAATCTGATAGTCTCATGGCTTCTAAGTCGGAGTTGGAACAAACGGGACTTGATGTTTAA

Peptide Sequence

PEP ID

XP_016491766.1
PEP Infomation

PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like [Nicotiana tabacum]
Sequence

METLKISTTPSTMSHIQNQIHPLNLKPYPLIRNSRILGVYNNKGGRTFSFTLTCKLKVKT
VKGTKTNNEKSFSGQITVPDSDSAPPIIEAEEGSIGNGEKKVEQKNSVSGSGLLKKLPRK
FLGILSNLPLAIAEMFAVAGLMALGTFIDQGEAPDYYFQKFPDDHPSLGFFSWRWVLTLG
FDHMFSSPVFLGTLTLLGASLMACTYTTQIPLVKVARRWSFLNSAETIRKQEYADTLPRA
SVKDLGVILMGDGYEVFSKGPALYAFKGLAGRFAPIGVHLSLLLVMSGGTLSATGSFRGA
VTVPQGLNFVAGDVLSPSGFLSTPSDAFSTEIHVNRFSMDYYDSGEVSQFHTDLSLYDLN
GKEVMRKTISVNDPLRYGGITIYQTDWSISALQVLKDGKGPFNLAMAPLQMNGGDKKLFG
TFLPVEDGDSPNVKGISMLARDLQSVILYDKQGKFAGVRRPNSKLPIEIDGTKIVIVDAI
GSSGLDLKTDPGVPVVYAGFGALMLTTCISYLSHTQLWALQDGTSVVVGGKTNRAKGEFP
DAINRLLDQVPELVESSSSKESDSLMASKSELEQTGLDV

Transcript Sequence

Gene sequence data has not been registered.